Researchers from the University of Illinois have, for the first time, uncovered the complex interdependence and orchestration of metabolic reactions, gene regulation, and environmental cues of clostridial metabolism, providing new insights for advanced biofuel development.
Microbial metabolism is a means by which a microbe uses nutrients and generates energy to live and reproduce. It typically involves complex biochemical processes implemented through the orchestration of metabolic reactions and gene regulation, as well as their interactions with environmental cues.
One canonical example is the Acetone–butanol–ethanol (ABE) fermentation by Clostridium acetobutylicum, during which cells convert carbon sources to organic acids that are later re-assimilated to produce solvents as a strategy for cellular survival.
“Clostridium is very much like a factory during fermentation which converts carbon sources into renewable, advanced biofuels that can be directly used to fuel your cars”. “The complexity and systems nature of the process have been largely under-appreciated, rendering challenges in understanding and optimizing solvent (ABE) production.”
“In this study, the researchers developed an integrated computational framework for the analysis and exploitation of the solvent metabolism by C. acetobutylicu.”
The paper, “Integrated, Systems Metabolic Picture of Acetone-Butanol-Ethanol Fermentation by Clostridium acetobutylicum,” appearing in this week’s Early Edition of Proceedings of the National Academy of Sciences of the United States of America.
“It provides a quantitative tool for generating new hypotheses and for guiding strain design and protocol optimization—invaluable for the development of efficient metabolic engineering strategies, expediting the development of advanced biofuels. More broadly, by using the ABE fermentation as an example, the work further sheds light on systems biology toward an integrated and quantitative understanding of complex microbial physiology.”
